Purrenhage Jennifer L., Niewiarowski P.H., Moore F.B.-G. 2009. Regional population dynamics of spotted salamanders (Ambystoma maculatum) in a fragmented landscape. Molecular Ecology (In Press)

Moore, Francisco B.-G., and Woods, R.J. 2006 Tempo and Constraint of Adaptive Evolution in Escherichia  coli. Biological Journal of the Linnean Society 88: 403-411 

Marks, C., West, T., Bagatto B., and  Moore, F.B.-G. 2005 Developmental Environment Alters Conditional Aggression in Zebrafish. Copeia (4): 901-908 

Moore, Francisco B.-G., and D. E. Rozen, and R. E. Lenski. 2000 Pervasive compensation for deleterious mutations in experimental populations of E. coli. Proceedings of the Royal Society London B. 267: 515-522

Whitlock, M. C., P. C. Phillips, F. B.-G. Moore and S. J. Tonsor. 1995 Multiple fitness peaks and epistasis. Annual Review of Ecology and Systematics 26: 601-629.  

Moore, Francisco B.-G., and S. J. Tonsor. 1994 A simulation of Wright's shifting-balance process: migration and the three phases. Evolution 48: 69-80